Cecret
importedsoftware/cecret
Reference-based consensus creation
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- UPHL-BioNGS
- Country
- unknown
- Homepage
- github.com/UPHL-BioNGS/Cecret
- Repository
- github.com/UPHL-BioNGS/Cecret
- Documentation
- unknown
- Tags
- amplicon · amplicon-sequencing · bioinformatics · consensus-sequence · freyja · iqtree · ivar · mafft · measles · mpox · nextclade · nextflow · nextflow-pipeline · pangolin · phylogenetics · public-health · sars-cov-2 · variant-calling · viral-genomics · wastewater
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- walkercreekbioinformatics · freyja · nextclade · nextflow · public-health · variant-calling · viral-genomics
A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.
- nf-ncov-vocbioinformatics · nextflow · sars-cov-2 · variant-calling
A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 or Mpox genomes. Workflow is developed in collaboration with VIRUS-MVP (https://github.com/cidgoh/VIRUS-MVP) which can…
- nf-skyline-dia-msbioinformatics · nextflow · nextflow-pipeline
Nextflow workflow for performing DIA proteomics
- Pipelines_Inmegenbioinformatics · nextflow-pipeline · variant-calling
Flujos de trabajos desarrollados y automatizados en el Intituto Nacional de Medicina Genómica para el procesamiento de datos genómicos y transcriptómicos.
- vaperbioinformatics · public-health · viral-genomics
Viral (meta)-genome assembly pipeline.
- bronkoamplicon-sequencing · variant-calling
Ultra-rapid detection of viral variants directly from sequencing data
- api.github.com/repos/UPHL-BioNGS/Cecretretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-08-25, 61 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/1.json→ .entries["cecret"]
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