openmedical/registry
← registry

MMseqs2

imported

software/mmseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

Machine-generated from the listed sources and not yet reviewed by a human.

MMseqs2 project image
GitHub preview card for soedinglab/MMseqs2. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
active
Maturity
deployed
Organization
soedinglab
Country
unknown
Homepage
mmseqs.com
Repository
github.com/soedinglab/MMseqs2
Documentation
unknown
Tags
alignment · bioinformatics · blast · linclust · metagenomics · mmseqs · profile-search · sequence-clustering
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • MMseqs2-Appbioinformatics · mmseqs · profile-search

    MMseqs2 app to run on your workstation or servers

  • musclebioinformatics · sequence-clustering

    Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and…

  • Wochenendealignment · bioinformatics · metagenomics

    Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3

  • Metagenomic-DeepFRImmseqs

    Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.

  • metagraphalignment · metagenomics

    Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly

  • bac-genomics-scriptsbioinformatics · blast

    Collection of scripts for bacterial genomics

sources
  1. api.github.com/repos/soedinglab/MMseqs2
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-25, 2122 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/23.json→ .entries["mmseqs2"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.