SNPBac
importedsoftware/snpbac
SNP and variant calling pipeline for bacteria
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/lmc297/SNPBac
- Documentation
- unknown
- Tags
- bacterial-genomes · snp-genotyping · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- WGS-Analysis-VariantCallingbacterial-genomes · variant-calling
Nextflow pipeline for whole-genome sequencing (WGS) analysis and variant calling in bacterial genomes using Illumina data, supporting de novo assembly and reference-based analysis.
- baktabacterial-genomes
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
- cgviewbacterial-genomes
CGView is a Java package for generating high-quality, zoomable maps of circular genomes.
- PHISTbacterial-genomes
Phage-Host Interaction Search Tool
- PhyloTracebacterial-genomes
PhyloTrace is a GUI platform for bacterial monitoring offering a toolkit of analyses like hashed cgMLST typing and Antimicrobial Resistance Screening.
- SKAbacterial-genomes
Split Kmer Analysis
- api.github.com/repos/lmc297/SNPBacretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2018-02-26, 7 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/38.json→ .entries["snpbac"]
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