somalier

imported

software/somalier

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

Machine-generated from the listed sources and not yet reviewed by a human.

somalier project image — GitHub preview card for brentp/somalier. Served by its origin, not stored here, and not covered by this registry’s licence.

record

Category: Software & Systems
Subcategory: unknown
License: MIT(osi)
Status: active
Maturity: deployed
Organization: unknown
Country: unknown
Homepage: unknown
Repository: github.com/brentp/somalier
Documentation: unknown
Tags: bioinformatics · cancer-genomics · genomics
Regulatory: unknown

built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

maftoolsbioinformatics · cancer-genomics · genomics
Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
ideogramcancer-genomics · genomics
Chromosome visualization for the web
OctopuSVcancer-genomics · genomics
Merge and compare structural variants across callers, samples, and platforms. Standardizes BND-heavy output from GRIDSS, SvABA, Sniffles, and more.
package-moPepGencancer-genomics · genomics
Multi-Omics Peptide Generator
CANCER_VAR_CALLbioinformatics · cancer-genomics
End-to-end somatic and germline variant calling pipeline using BWA, GATK HaplotypeCaller, VEP and ANNOVAR for tumor NGS analysis
genome-spybioinformatics · cancer-genomics
A visualization grammar and GPU-accelerated toolkit for genomic data

sources

api.github.com/repos/brentp/somalier
retrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-07-20, 332 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/41.json→ .entries["somalier"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.