NGSOmics_Programming
importedsoftware/ngsomics-programming
Computational biology/bioinformatics workflows, codes, tech & concept notes on NGS data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- 10x-genomics · atac-seq · bulk · chip-seq · deconvolution · eqtl · genomics · genotype · metabolomics · methylation · proteomics · rna-seq · single-cell · spatial-transcriptomics · whole-genome-sequencing
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- MetaInformAnteqtl · genomics · proteomics · rna-seq · single-cell
METAINFORMANT is a Python 3.11+ multi-omic bioinformatics toolkit spanning 28 modules and 650+ files for DNA, RNA-seq, protein, epigenome and single-cell analysis, GWAS with fine-mapping and eQTL,…
- deepStatsatac-seq · chip-seq · genomics · rna-seq
deepStats: a stastitical toolbox for deeptools and genomic signals
- pseudoBulkbulk · rna-seq · single-cell
Cluster-specific pseudo-bulk analysis of 10X single-cell RNA-seq data by connecting Seurat to the VBC RNA-seq pipeline.
- seq2scienceatac-seq · chip-seq · rna-seq
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
- seurigiotto-benchmark-framework10x-genomics · deconvolution · genomics
Optimized pipelines for Spatial Transcriptomics (ST) data analysis using Seurat & Giotto, designed for reproducible benchmarking and biological insight.
- bambu-pipegenomics · rna-seq · single-cell · spatial-transcriptomics
Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu
- api.github.com/repos/anne-ds-ai/NGSOmics_Programmingretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2025-06-22, 7 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/40.json→ .entries["ngsomics-programming"]
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