scATAC-pro
importedsoftware/scatac-pro
A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/wbaopaul/scATAC-pro
- Documentation
- unknown
- Tags
- atac-seq · bioinformatics · chromatin-accessibiity · pipeline · single-cell
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- proatacatac-seq · pipeline · single-cell
Preprocessing pipeline for (sc)ATAC data
- ChromDragoNNchromatin-accessibiity
Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellular contexts"
- seq2scienceatac-seq · bioinformatics · pipeline
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
- snsatac-seq · bioinformatics · pipeline
Analysis pipelines for genomic sequencing data
- rustscenicatac-seq · bioinformatics · single-cell
Faster, lower-memory Rust rewrite of the SCENIC and SCENIC+ analysis stack: GRN, AUCell, cisTarget, topics, peak-to-gene links, and eRegulons.
- gchromVARatac-seq · single-cell
Cell type specific enrichments using finemapped variants and quantitative epigenetic data
- api.github.com/repos/wbaopaul/scATAC-proretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-03-16, 83 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
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/v1/entries/0.json→ .entries["scatac-pro"]
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